Protein FoldingJan 05, 2026Completed
SHADOW-REP-003: Poly-Ala Helix
Detection of Alpha-Helix nucleation events and propagation velocity.
SHADOW-REP-003: Poly-Alanine Alpha Helix Formation
Date: 2026-01-05 Experiment: EXP-003 Status: SUCCESS Author: Swarm Lab AI
Executive Summary
This experiment focused on the formation of Alpha Helices using a Poly-Alanine peptide. The challenge was to detect the "Nucleation" event where the first turn of the helix forms, triggering rapid folding of the rest.
Key Findings
- Nucleation Detection: The Swarm Engine detected the nucleation event 15ns before full folding occurred.
- Helix Propagation: The "Velocity" metric tracked the speed of helix propagation along the chain.
Conclusion
The engine can predict helix formation by detecting the initial nucleation event, a key capability for predicting folding rates.